Browse of TCMCG057C29423 protein

CDS

Accession Number	TCMCG057C29423
gbkey	CDS
Protein Id	XP_018489790.1
Location	join(43508681..43508710,43508958..43509024,43509155..43509311,43509393..43509550,43509871..43510136,43510234..43510452,43510535..43510643,43510758..43510873,43511166..43511264,43511360..43511469,43511754..43511828,43512213..43512291,43512371..43512517,43512602..43512682,43512788..43512907,43513167..43513289,43513672..43513749,43513857..43513945,43514158..43514266,43514354..43514422,43514503..43514610,43514812..43514867,43514936..43515113,43515202..43515303,43515390..43515461,43515586..43515651,43515811..43515876,43516224..43516307,43516397..43516513,43516608..43516682,43516783..43516860,43516950..43516991)
Gene	LOC108860405
GeneID	108860405
Organism	Raphanus sativus

Protein

Length	1114aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018634288.1
Definition	PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTGTGATGACTCCGCCGCCGATTGATCAGCAAGAGGACGAGGAGATGCTGGTTCCGCATTCTGATGTAGTCGAGGGACCTCAGCCCATGGAAGTTGCTCAACCTGAGGCGGCTGCTGGTGATGCTGTTGTGGAGAATCCGCCAGTGGAGGAACCTCCCACTATGAAATTCACTTGGCTTATCCCAGGTTTCACTAGGCTCAACACCAGGAAGCATTACTCTGATGTTTTCGTTGCTGGAGGTTACAAATGGCGAGTATTGATTTTCCCGAAAGGAAACAATGTGGACCATTTGGCCATGTACTTGGATGTTGCTGACTCTGGGAGTCTGCCATACGGGTGGTGCAGGTATGCACATTTCGGCCTGACTGTAGTGAATCAGATCAACAACAGATATTCCGTCAGAAAAGAGACCCAACATCAATTCAATGCAAGAGAAAGCGATTGGGGGTTTACATCATTCATGCCTCTGGGCGAGCTCTACGATCCCACTCGTGGGTATTTAGTTAATGATACTATTCTGATTGAAGCTGAAGTTTCTGTGCGGAAGGTTCTTGATTACTGGTCATATGACTCAAAAAAAGAGACGGGGTTTGTTGGACTTAAGAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTAGAGACGTTATACCACATTCCTTACTTCAGAAAGGCTGTTTACCACATGCCGACAACTGAGAATGATGCACCTACGGCGAGCATACCATTGGCCCTCCAGAGTTTGTTTTACAAACTTCAATATAATGACAACAGTGTAGCTACAAAGGAGCTGACAAAGTCGTTTGGCTGGGATACCTATGATTCGTTCATGCAACATGATGTTCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAGAAGTTATTCGAGGGTCACCAAATGAATTACATTGAGTGCATCAATGTAGATTACAAATCCACACGGAAAGAATCATTCTATGATCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGCTTCGTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCAAGAAAAGGTGTTCTGTTCACCGACTTTCCACCCGTACTTCAACTTCAGCTCAAGAGGTTTGAATATGATTTTATGCGAGACACAATGGTGAAGATAAATGATCGATATGAGTTTCCTCTTCAACTGGATCTCGACAGAGAGAATGGAAAATATTTATCCCCTGATGCTGACAAGAGTGTCCGTAACCTCTATACACTCCACAGTGTCTTAGTTCATAGTGGTGGAGTTAATGGAGGGCACTATTATGCTTATATCAGGCCAACACTCTCAGACCAGTGGTATAAATTCGATGATGAAAGGGTGACAAAGGAAGATGTGAATAGGGCACTGGAAGAGCAATATGGTGGCGAAGAAGAGTTACCACAGAACAATCCTGGTTTAAATAATCCACCTTTTAAATTCACAAAGTACTCGAACGCATACATGCTTGTTTACATTCGGGAAAGCGACAAGGATAAAATAATATGCAACGTTGATGAAAAAGACGTTGCAGAACATTTACGGGTGAGGCTGAAAAAAGAACAAGAAGAAAAAGAAGATAAAAGAAAATACAAGGCTGAAGCTCACCTCTTCACGACAGTCAAGGTCGCAAGAGATGAAGACATAACAGAGCAAGTTGGAAAGAATATGTACTTTGATCTTGTTGATCATGAGAAAGTCAAGAGTTTTCGAATCGAGAAACAGACCCCCTTTTTACGTTTTAAGGAAGAGGTGGCCAAAGAATTTGGTGTCCCGGTTGAGATGCAGCGGTTCTGGATTTGGGCAAAGCGGCAAAACCATACTTATCGTCCCAACCGCCCCCTGTTATCTCATGAAGAATTACAGATGGTTGGACATATAAAAGAGGCATCAAACAAGGCAAACAATGCTGAACTAAAGCTGTTCTTGGAAATAGAGCGTGGACCGGATGGGCGTCCTATTCCTCCCCCAGACAAGTCACATGAAGATATTCTTCTTTTCTTTAAGCTCTACGACCCTGAGAATGGAGTACTAAGATATGTTGGCAGGCTCATGGTGAAAAATTCCAGTAAGCCCATGGATATAATAGGGGAACTGATTCAAATGGCCGGCTTTACTCCTGATGAGGAAATAGAACTTTTTGAGGAAATAAAGTTTCAACCTTGTGTAATGTGCGAACAACTGGATAAGAATACGTCTTTTAGACTATCTCAAATTGAAGATGGAGATATCATTTGCTATCAGAAAGCTCTTTCTATCCAGGACGATGAATATTCATACCCGGATGTGCCATTGTTTTTGGAGTATGTACAGAATCGAGAGGTGGTGCGTTTTCGTACCCTGGAAAAACCAAAAGATGATGAGTTTACTATGGAGTTGTCAAAGTTGCACACATATGACGATGTTGTGGAAAGATTGGCTGAGAAGATTGGCCTTGATGATCCGTCGAAAATTAGGCTTACTCCTCACAATTGCTACTCCCAGCAACCCAAGCCTCAATATATCAAATACCGTGGAGTTGACCATCTTTCAGACATGTTAGCTCACTATAATCAGATGTCTGACATTTTGTATTATGAAGTTCTGGACATTCCCCTACCAGAATTGCAAGGTCTTAAGACTCTAAAAGTAGCTTTTCGTCATGCATCAAAGGACGAAGTGACAGTTCTCACTATGAGACTTCCTAAGCAGAGTACTGTGGGAGATGTTATTAACGAGCTTAAAACAAAGGTGGAGCTTTCACATCAAGATGCAGAATTGAGGTTGCTTGAGGTGTTTTCCCACAAAATCTACAAGATCTTTGCATCTACCGAAAGAATTGAGAGTATCAATGACCACTACTGGACTTTACTAGCGGAGGAGATACCCGAGGAAGAGAAAAATATTGGTCCCAATGCTCGGTTAATCCATGTGTACCATTTTACCAAAGAGGCTGGACAAAGTCAGCAAGTTCATAATTTCGGGGACCCCTTCATTTTGGTGATCCACGAAGGTGAAACTTTGGAAGAAATGAAGACCCGTATCCAAAAGAAACTTCATGTACCTGATGATGACTTTGCCAAGTGGAAGTTTGCTTCTTTTTCAATGGGACGTCCCGACTACTTGCAGGACACAGATGTTGTTTACAATCGCTTTCAGAGAAAGGACGTATATGGGGCGTGGGAGCAGTATCTTGGGGTGGAGCACGTTGATAATGCTCCTAAACGGGCTTATCATAACCGGCACGCATATGAGAAGCCGGTTAAAATATACAATTAG

Protein:   MTVMTPPPIDQQEDEEMLVPHSDVVEGPQPMEVAQPEAAAGDAVVENPPVEEPPTMKFTWLIPGFTRLNTRKHYSDVFVAGGYKWRVLIFPKGNNVDHLAMYLDVADSGSLPYGWCRYAHFGLTVVNQINNRYSVRKETQHQFNARESDWGFTSFMPLGELYDPTRGYLVNDTILIEAEVSVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLETLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHQMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHDLQDARKGVLFTDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADKSVRNLYTLHSVLVHSGGVNGGHYYAYIRPTLSDQWYKFDDERVTKEDVNRALEEQYGGEEELPQNNPGLNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDVAEHLRVRLKKEQEEKEDKRKYKAEAHLFTTVKVARDEDITEQVGKNMYFDLVDHEKVKSFRIEKQTPFLRFKEEVAKEFGVPVEMQRFWIWAKRQNHTYRPNRPLLSHEELQMVGHIKEASNKANNAELKLFLEIERGPDGRPIPPPDKSHEDILLFFKLYDPENGVLRYVGRLMVKNSSKPMDIIGELIQMAGFTPDEEIELFEEIKFQPCVMCEQLDKNTSFRLSQIEDGDIICYQKALSIQDDEYSYPDVPLFLEYVQNREVVRFRTLEKPKDDEFTMELSKLHTYDDVVERLAEKIGLDDPSKIRLTPHNCYSQQPKPQYIKYRGVDHLSDMLAHYNQMSDILYYEVLDIPLPELQGLKTLKVAFRHASKDEVTVLTMRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFSHKIYKIFASTERIESINDHYWTLLAEEIPEEEKNIGPNARLIHVYHFTKEAGQSQQVHNFGDPFILVIHEGETLEEMKTRIQKKLHVPDDDFAKWKFASFSMGRPDYLQDTDVVYNRFQRKDVYGAWEQYLGVEHVDNAPKRAYHNRHAYEKPVKIYN